Chemical elements
  Platinum
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    PDB 1a2e-2bho
    PDB 2ch8-3un9
    PDB 3vdk-5bna
      3vdk
      4dd4
      4dd6
      4dd7
      4dd9
      4ddb
      4ddc
      4dl4
      4dl5
      4dl6
      4dl7
      4eey
      5bna

Platinum in PDB, part 3 (101-113), PDB files 3vdk - 5bna






Experimental structures of coordination spheres of Platinum (Pt) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Platinum atoms.
PDB files 101-113 (3vdk - 5bna):
  1. 3vdk - Crystal Structure of Circumsporozoite Protein Atsr Domain, R32 Platinum-Bound Form
  2. 4dd4 - Eval Processed Hewl, Cisplatin Dmso Glycerol
  3. 4dd6 - Eval Processed Hewl, Cisplatin Dmso Paratone
  4. 4dd7 - Eval Processed Hewl, Carboplatin Dmso Glycerol
  5. 4dd9 - Eval Processed Hewl, Carboplatin Dmso Paratone
  6. 4ddb - Eval Processed Hewl, Cisplatin Dmso Paratone pH 6.5
  7. 4ddc - Eval Processed Hewl, Cisplatin Dmso Nag Silicone Oil
  8. 4dl4 - Human Dna Polymerase Eta Inserting Dcmpnpp Opposite the 3'G of Cisplatin Crosslinked Gs (Pt-GG1).
  9. 4dl5 - Human Dna Polymerase Eta Inserting Dcmpnpp Opposite the 5'G of Cisplatin Crosslinked Gs (Pt-GG2).
  10. 4dl6 - Human Dna Polymerase Eta Extending Primer Immediately After Cisplatin Crosslink (Pt-GG3).
  11. 4dl7 - Human Dna Polymerase Eta Fails to Extend Primer 2 Nucleotide After Cisplatin Crosslink (Pt-GG4).
  12. 4eey - Crystal Structure of Human Dna Polymerase Eta in Ternary Complex With A Cisplatin Dna Adduct
  13. 5bna - The Primary Mode Of Binding of Cisplatin to A B-Dna Dodecamer: C-G-C-G-A-A-T-T-C-G-C-G


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Platinum coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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