Platinum in PDB 9b6z: uc(Nmr) Solution Structure of the 1:1 Complex of A Platinum(II) Compound Bound to MYC1234 G-Quadruplex

The binding sites of Platinum atom in the uc(Nmr) Solution Structure of the 1:1 Complex of A Platinum(II) Compound Bound to MYC1234 G-Quadruplex (pdb code 9b6z). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total only one binding site of Platinum was determined in the uc(Nmr) Solution Structure of the 1:1 Complex of A Platinum(II) Compound Bound to MYC1234 G-Quadruplex, PDB code: 9b6z:

Platinum binding site 1 out of 1 in the uc(Nmr) Solution Structure of the 1:1 Complex of A Platinum(II) Compound Bound to MYC1234 G-Quadruplex


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of uc(Nmr) Solution Structure of the 1:1 Complex of A Platinum(II) Compound Bound to MYC1234 G-Quadruplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Pt101 b:0.4 occ:1.00 PT A:H9C101 0.0 0.4 1.0 N4 A:H9C101 2.2 0.4 1.0 N1 A:H9C101 2.2 0.4 1.0 N3 A:H9C101 2.2 0.4 1.0 N2 A:H9C101 2.2 0.4 1.0 C12 A:H9C101 3.0 0.5 1.0 C23 A:H9C101 3.0 0.4 1.0 C11 A:H9C101 3.0 0.5 1.0 C24 A:H9C101 3.0 0.4 1.0 C22 A:H9C101 3.3 0.4 1.0 C13 A:H9C101 3.3 0.4 1.0 C10 A:H9C101 3.3 0.4 1.0 C1 A:H9C101 3.3 0.5 1.0 H22 A:H9C101 3.4 0.4 1.0 H13 A:H9C101 3.4 0.4 1.0 H10 A:H9C101 3.4 0.4 1.0 H1 A:H9C101 3.4 0.5 1.0 O6 A:DG5 3.7 0.5 1.0 O6 A:DG18 4.1 0.5 1.0 C7 A:H9C101 4.4 0.5 1.0 O6 A:DG12 4.4 0.5 1.0 C19 A:H9C101 4.4 0.4 1.0 C4 A:H9C101 4.4 0.5 1.0 C16 A:H9C101 4.4 0.5 1.0 C6 A:DG5 4.4 0.5 1.0 H1 A:DG18 4.5 0.5 1.0 C9 A:H9C101 4.6 0.5 1.0 C21 A:H9C101 4.6 0.4 1.0 C14 A:H9C101 4.6 0.5 1.0 C2 A:H9C101 4.6 0.5 1.0 C6 A:DG18 4.6 0.5 1.0 H3 A:DT10 4.6 0.7 1.0 H1 A:DG5 4.6 0.5 1.0 O6 A:DG9 4.7 0.5 1.0 H72 A:DT19 4.7 0.9 1.0 N1 A:DG18 4.8 0.5 1.0 H73 A:DT19 4.8 1.0 1.0 H1 A:DG12 4.9 0.5 1.0 N1 A:DG5 4.9 0.5 1.0

W.Liu, B.C.Zhu, L.Y.Liu, X.Y.Xia, J.Jang, J.Dickerhoff, D.Yang, Z.W.Mao. Solution Structures and Effects of A Platinum Compound Successively Bound Myc G-Quadruplex. Nucleic Acids Res. V. 52 9397 2024.
ISSN: ESSN 1362-4962
PubMed: 39077944
DOI: 10.1093/NAR/GKAE649