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Platinum in PDB 1ddp: Solution Structure of A Cisplatin-Induced [Catagctatg]2 Interstrand Cross-Link

Platinum Binding Sites:

The binding sites of Platinum atom in the Solution Structure of A Cisplatin-Induced [Catagctatg]2 Interstrand Cross-Link (pdb code 1ddp). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total only one binding site of Platinum was determined in the Solution Structure of A Cisplatin-Induced [Catagctatg]2 Interstrand Cross-Link, PDB code: 1ddp:

Platinum binding site 1 out of 1 in 1ddp

Go back to Platinum Binding Sites List in 1ddp
Platinum binding site 1 out of 1 in the Solution Structure of A Cisplatin-Induced [Catagctatg]2 Interstrand Cross-Link


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of Solution Structure of A Cisplatin-Induced [Catagctatg]2 Interstrand Cross-Link within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt11

b:0.0
occ:1.00
PT1 A:CPT11 0.0 0.0 1.0
N2 A:CPT11 2.0 0.0 1.0
N1 A:CPT11 2.0 0.0 1.0
N7 A:DG5 2.0 0.0 1.0
N7 B:DG5 2.0 0.0 1.0
H21 A:CPT11 2.5 0.0 1.0
H12 A:CPT11 2.5 0.0 1.0
H11 A:CPT11 2.5 0.0 1.0
H23 A:CPT11 2.5 0.0 1.0
H13 A:CPT11 2.6 0.0 1.0
H22 A:CPT11 2.6 0.0 1.0
C8 B:DG5 3.0 0.0 1.0
C8 A:DG5 3.0 0.0 1.0
C5 A:DG5 3.1 0.0 1.0
C5 B:DG5 3.1 0.0 1.0
H8 B:DG5 3.2 0.0 1.0
H8 A:DG5 3.2 0.0 1.0
OP1 B:DG5 3.2 0.0 1.0
OP1 A:DG5 3.2 0.0 1.0
O6 A:DG5 3.5 0.0 1.0
O6 B:DG5 3.5 0.0 1.0
C6 B:DG5 3.7 0.0 1.0
C6 A:DG5 3.7 0.0 1.0
N9 A:DG5 4.2 0.0 1.0
N9 B:DG5 4.2 0.0 1.0
C4 A:DG5 4.2 0.0 1.0
C4 B:DG5 4.2 0.0 1.0
P B:DG5 4.4 0.0 1.0
P A:DG5 4.4 0.0 1.0
O5' B:DG5 4.8 0.0 1.0
O5' A:DG5 4.8 0.0 1.0
N3 B:DA4 4.9 0.0 1.0
N3 A:DA4 4.9 0.0 1.0
OP2 B:DG5 4.9 0.0 1.0
OP2 A:DG5 4.9 0.0 1.0
H1' B:DA4 4.9 0.0 1.0
H1' A:DA4 4.9 0.0 1.0
N1 B:DG5 5.0 0.0 1.0
N1 A:DG5 5.0 0.0 1.0

Reference:

H.Huang, L.Zhu, B.R.Reid, G.P.Drobny, P.B.Hopkins. Solution Structure of A Cisplatin-Induced Dna Interstrand Cross-Link. Science V. 270 1842 1995.
ISSN: ISSN 0036-8075
PubMed: 8525382
Page generated: Wed Dec 16 02:03:36 2020

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