The binding sites of Platinum atom in the structure of Structural Basis For The Substrate Specificity Of The Feruloyl Esterase Domain Of the Cellulosomal Xylanase Z of Clostridium Thermocellum (pdb code 1jjf). This binding sites where shown with 5.0 Angstroms radius around Platinum atom.
The 1jjf structure was solved by F.D.SCHUBOT, I.A.KATAEVA, D.L.BLUM, A.K.SHAH, L.G.LJUNGDAHL, J.P.ROSE, B.C.WANG, SOUTHEAST COLLABORATORY FOR STRUCTURALGENOMICS (SECSG), with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
| Resolution (A) | 19.0-1.8 | | Space group | P212121 | | a (A) | 43.293 | | b (A) | 63.652 | | c (A) | 79.777 | | alpha (°) | 90.00 | | beta (°) | 90.00 | | gamma (°) | 90.00 | | Rfactor (%) | 18.9 | | Rfree (%) | 20.6 |
|
Platinum binding site 1 out of 1 in 1jjf
| 
Click to enlarge | 
Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Platinum in the PDB 1jjf. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Platinum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ile90, A: Met173, A: Ala198, A: Hoh485, | conact list:
| Atom | Atom | Distance (A) | | Pt | CB A:Ile90 | 4.65 | | Pt | CD1 A:Ile90 | 3.69 | | Pt | CG1 A:Ile90 | 4.62 | | Pt | CB A:Met173 | 4.96 | | Pt | CE A:Met173 | 3.19 | | Pt | CG A:Met173 | 3.49 | | Pt | SD A:Met173 | 2.75 | | Pt | CB A:Ala198 | 4.97 | | Pt | O A:Hoh485 | 4.52 |
| interactive model:
|
|