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Platinum in PDB 1nnw: Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608

Protein crystallography data

The structure of Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608, PDB code: 1nnw was solved by Southeast Collaboratory For Structural Genomics (Secsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.90
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 50.140, 50.842, 64.403, 83.70, 81.64, 81.77
R / Rfree (%) 21.6 / 23.5

Other elements in 1nnw:

The structure of Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608 also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Platinum Binding Sites:

The binding sites of Platinum atom in the Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608 (pdb code 1nnw). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total 4 binding sites of Platinum where determined in the Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608, PDB code: 1nnw:
Jump to Platinum binding site number: 1; 2; 3; 4;

Platinum binding site 1 out of 4 in 1nnw

Go back to Platinum Binding Sites List in 1nnw
Platinum binding site 1 out of 4 in the Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt301

b:61.6
occ:0.70
SD A:MET79 2.4 42.1 1.0
CG A:MET79 3.1 39.8 1.0
CE A:MET79 3.3 42.9 1.0
CB A:MET79 3.5 38.3 1.0
O A:MET79 4.2 38.0 1.0
O A:HOH321 4.3 34.2 1.0
C A:MET79 4.4 38.3 1.0
CA A:MET79 4.5 38.0 1.0

Platinum binding site 2 out of 4 in 1nnw

Go back to Platinum Binding Sites List in 1nnw
Platinum binding site 2 out of 4 in the Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 2 of Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt302

b:0.2
occ:0.40
SD A:MET183 2.2 51.1 1.0
CG A:MET183 3.1 42.3 1.0
CE A:MET183 3.3 49.7 1.0
CB A:MET183 4.2 38.7 1.0

Platinum binding site 3 out of 4 in 1nnw

Go back to Platinum Binding Sites List in 1nnw
Platinum binding site 3 out of 4 in the Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 3 of Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Pt301

b:72.4
occ:0.70
CE B:MET79 2.7 38.3 1.0
SD B:MET79 2.8 43.4 1.0
CG B:MET79 3.0 37.8 1.0
CB B:MET79 3.9 36.3 1.0
O B:HOH334 4.1 41.7 1.0
O B:MET79 4.4 37.4 1.0
C B:MET79 4.7 36.9 1.0
CA B:MET79 4.9 35.8 1.0

Platinum binding site 4 out of 4 in 1nnw

Go back to Platinum Binding Sites List in 1nnw
Platinum binding site 4 out of 4 in the Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 4 of Hypothetical Protein From Pyrococcus Furiosus Pfu-1218608 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Pt302

b:66.3
occ:0.40
SD B:MET183 3.1 48.8 1.0
CB B:MET183 4.1 35.0 1.0
CG B:MET183 4.1 38.9 1.0
CE B:MET183 4.3 47.2 1.0
NH1 B:ARG188 4.9 43.7 1.0

Reference:

Southeast Collaboratory For Structural Genomics, Southeast Collaboratory For Structural Genomics (Secsg). N/A N/A.
Page generated: Wed Dec 16 02:03:41 2020

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