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Platinum in PDB 1sf9: Crystal Structure of Bacillus Subtilis Yfhh Protein : Putative Transcriptional Regulator

Protein crystallography data

The structure of Crystal Structure of Bacillus Subtilis Yfhh Protein : Putative Transcriptional Regulator, PDB code: 1sf9 was solved by G.Minasov, L.Shuvalova, J.S.Brunzelle, D.E.Kim, F.R.Collart, W.F.Anderson, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 1.71
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 56.142, 46.486, 50.511, 90.00, 114.98, 90.00
R / Rfree (%) 17.2 / 20.4

Other elements in 1sf9:

The structure of Crystal Structure of Bacillus Subtilis Yfhh Protein : Putative Transcriptional Regulator also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Platinum Binding Sites:

The binding sites of Platinum atom in the Crystal Structure of Bacillus Subtilis Yfhh Protein : Putative Transcriptional Regulator (pdb code 1sf9). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total only one binding site of Platinum was determined in the Crystal Structure of Bacillus Subtilis Yfhh Protein : Putative Transcriptional Regulator, PDB code: 1sf9:

Platinum binding site 1 out of 1 in 1sf9

Go back to Platinum Binding Sites List in 1sf9
Platinum binding site 1 out of 1 in the Crystal Structure of Bacillus Subtilis Yfhh Protein : Putative Transcriptional Regulator


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of Crystal Structure of Bacillus Subtilis Yfhh Protein : Putative Transcriptional Regulator within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt129

b:9.8
occ:0.20
CE A:MET25 1.0 19.7 0.8
SD A:MET25 1.6 17.6 0.8
O A:HOH131 2.2 19.2 0.2
O A:HOH132 2.3 3.6 0.2
CL A:CL130 2.4 12.8 0.2
SD A:MET25 2.4 10.6 0.2
CG A:MET25 2.5 16.9 0.8
CG A:MET69 2.7 13.7 0.4
CG A:MET25 2.9 10.7 0.2
CB A:MET69 3.3 12.3 0.4
CB A:MET25 3.4 13.0 0.8
CB A:MET69 3.4 10.8 0.6
CB A:MET25 3.5 11.3 0.2
SD A:MET69 3.5 20.4 0.4
CG A:MET69 3.7 10.5 0.6
CE1 A:TYR29 3.7 11.3 0.8
CE A:MET25 3.9 11.1 0.2
O A:HOH304 4.0 25.6 0.5
CD1 A:TYR29 4.1 8.2 0.8
CZ A:TYR29 4.5 10.7 0.8
C A:MET25 4.6 12.5 0.8
C A:MET25 4.6 12.0 0.2
CD1 A:TYR29 4.6 17.2 0.2
CA A:MET25 4.6 12.9 0.8
CE A:MET69 4.6 11.8 0.6
CG A:GLU26 4.6 19.4 1.0
O A:HOH186 4.6 27.7 0.4
N A:GLU26 4.6 12.4 1.0
CA A:MET25 4.7 11.6 0.2
CG A:LYS66 4.8 8.2 0.2
CA A:MET69 4.8 9.1 0.4
CE1 A:TYR29 4.8 17.8 0.2
OH A:TYR29 4.8 14.1 0.8
O A:LYS66 4.8 7.7 0.2
CA A:MET69 4.8 8.0 0.6
O A:LYS66 4.8 7.9 0.8
CA A:LYS66 4.9 7.6 0.8
CA A:LYS66 4.9 7.9 0.2
O A:SER22 4.9 11.2 1.0
O A:MET25 5.0 13.9 0.8
SD A:MET69 5.0 14.2 0.6

Reference:

G.Minasov, L.Shuvalova, J.S.Brunzelle, D.E.Kim, F.R.Collart, W.F.Anderson. Crystal Structure of Bacillus Subtilis Yfhh Hypothetical Protein To Be Published.
Page generated: Wed Dec 16 02:03:48 2020

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