Atomistry » Platinum » PDB 1uas-3co3 » 2k0t
Atomistry »
  Platinum »
    PDB 1uas-3co3 »
      2k0t »

Platinum in PDB 2k0t: High Resolution Solution uc(Nmr) Structures of Oxaliplatin-Dna Adduct

Platinum Binding Sites:

The binding sites of Platinum atom in the High Resolution Solution uc(Nmr) Structures of Oxaliplatin-Dna Adduct (pdb code 2k0t). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total only one binding site of Platinum was determined in the High Resolution Solution uc(Nmr) Structures of Oxaliplatin-Dna Adduct, PDB code: 2k0t:

Platinum binding site 1 out of 1 in 2k0t

Go back to Platinum Binding Sites List in 2k0t
Platinum binding site 1 out of 1 in the High Resolution Solution uc(Nmr) Structures of Oxaliplatin-Dna Adduct


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of High Resolution Solution uc(Nmr) Structures of Oxaliplatin-Dna Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt13

b:0.1
occ:1.00
PT A:1PT13 0.0 0.1 1.0
N7 A:DG7 2.0 0.2 1.0
N7 A:DG6 2.0 0.1 1.0
N1 A:1PT13 2.0 0.3 1.0
N2 A:1PT13 2.0 0.2 1.0
H21 A:1PT13 2.6 0.3 1.0
H12 A:1PT13 2.6 0.4 1.0
H22 A:1PT13 2.6 0.1 1.0
H11 A:1PT13 2.6 0.3 1.0
C8 A:DG6 2.8 0.2 1.0
C1 A:1PT13 2.9 0.2 1.0
C2 A:1PT13 2.9 0.3 1.0
C5 A:DG6 3.0 0.1 1.0
C5 A:DG7 3.0 0.3 1.0
C8 A:DG7 3.0 0.4 1.0
H8 A:DG6 3.0 0.3 1.0
H1 A:1PT13 3.2 0.2 1.0
H2'' A:DT5 3.2 0.2 1.0
H2 A:1PT13 3.2 0.4 1.0
O6 A:DG7 3.2 0.3 1.0
H8 A:DG7 3.3 0.4 1.0
C6 A:DG7 3.5 0.3 1.0
O6 A:DG6 3.6 0.1 1.0
C6 A:DG6 3.6 0.1 1.0
OP2 A:DG6 3.8 0.3 1.0
N9 A:DG6 3.9 0.2 1.0
C4 A:DG6 4.0 0.1 1.0
C2' A:DT5 4.2 0.2 1.0
H2' A:DT5 4.2 0.1 1.0
C4 A:DG7 4.2 0.5 1.0
N9 A:DG7 4.2 0.5 1.0
C3 A:1PT13 4.3 0.3 1.0
C6 A:1PT13 4.3 0.4 1.0
H3' A:DG6 4.3 0.4 1.0
H42 B:DC18 4.4 0.4 1.0
H31 A:1PT13 4.5 0.2 1.0
H61 A:1PT13 4.5 0.5 1.0
O5' A:DG6 4.5 0.3 1.0
H32 A:1PT13 4.7 0.3 1.0
H62 A:1PT13 4.7 0.4 1.0
P A:DG6 4.7 0.3 1.0
N1 A:DG7 4.8 0.5 1.0
N1 A:DG6 4.9 0.2 1.0

Reference:

D.Bhattacharyya, S.Ramachandran, S.Sharma, W.Pathmasiri, C.L.King, I.Baskerville-Abraham, G.Boysen, J.A.Swenberg, S.L.Campbell, N.V.Dokholyan, S.G.Chaney. Flanking Bases Influence the Nature of Dna Distortion By Platinum 1,2-Intrastrand (Gg) Cross-Links. Plos One V. 6 23582 2011.
ISSN: ESSN 1932-6203
PubMed: 21853154
DOI: 10.1371/JOURNAL.PONE.0023582
Page generated: Thu Oct 10 10:43:19 2024

Last articles

Ca in 9BBF
Ca in 9BAR
Ca in 9BB8
Ca in 9BCF
Ca in 9BHU
Ca in 9BHV
Ca in 9BI0
Ca in 8XNI
Ca in 8XNJ
Ca in 8X0K
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy