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Platinum in PDB 2xth: K2PTBR6 Binding to Lysozyme

Enzymatic activity of K2PTBR6 Binding to Lysozyme

All present enzymatic activity of K2PTBR6 Binding to Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of K2PTBR6 Binding to Lysozyme, PDB code: 2xth was solved by J.R.Helliwell, A.M.T.Bell, P.Bryant, S.Fisher, J.Habash, M.Helliwell, I.Margiolaki, S.Kaenket, Y.Watier, J.Wright, S.K.Yalamanchili, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.64 / 1.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.640, 78.640, 36.450, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 24.9

Other elements in 2xth:

The structure of K2PTBR6 Binding to Lysozyme also contains other interesting chemical elements:

Bromine (Br) 11 atoms

Platinum Binding Sites:

The binding sites of Platinum atom in the K2PTBR6 Binding to Lysozyme (pdb code 2xth). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total 2 binding sites of Platinum where determined in the K2PTBR6 Binding to Lysozyme, PDB code: 2xth:
Jump to Platinum binding site number: 1; 2;

Platinum binding site 1 out of 2 in 2xth

Go back to Platinum Binding Sites List in 2xth
Platinum binding site 1 out of 2 in the K2PTBR6 Binding to Lysozyme


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of K2PTBR6 Binding to Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt1130

b:17.5
occ:0.50
PT A:6BP1130 0.0 17.5 0.5
BR1 A:6BP1130 2.4 21.9 0.5
BR4 A:6BP1130 2.5 24.8 0.5
BR3 A:6BP1130 2.5 18.2 0.5
BR2 A:6BP1130 2.5 35.7 0.5
BR5 A:6BP1130 2.7 22.1 0.5

Platinum binding site 2 out of 2 in 2xth

Go back to Platinum Binding Sites List in 2xth
Platinum binding site 2 out of 2 in the K2PTBR6 Binding to Lysozyme


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 2 of K2PTBR6 Binding to Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt1131

b:16.1
occ:0.50
PT A:6BP1131 0.0 16.1 0.5
BR6 A:6BP1131 2.2 20.4 0.5
BR4 A:6BP1131 2.3 21.6 0.5
BR2 A:6BP1131 2.4 16.7 0.5
BR3 A:6BP1131 2.4 22.0 0.5
BR1 A:6BP1131 2.5 20.3 0.5
BR5 A:6BP1131 2.7 19.3 0.5
ND2 A:ASN65 4.3 19.3 1.0
O A:HOH2066 4.6 13.4 1.0
CB A:PRO79 4.9 12.3 1.0

Reference:

J.R.Helliwell, A.M.T.Bell, P.Bryant, S.Fisher, J.Habash, M.Helliwell, I.Margiolaki, S.Kaenket, Y.Watier, J.Wright, S.K.Yalamanchili. Time-Dependent Analysis of K2PTBR6 Binding to Lysozyme Studied By Protein Powder and Single Crystal X-Ray Analysis Z.Kristallogr. V. 225 570 2010.
ISSN: ISSN 0044-2968
DOI: 10.1524/ZKRI.2010.1349
Page generated: Wed Dec 16 02:04:05 2020

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