Atomistry » Platinum » PDB 3ef3-3wua » 3un9
Atomistry »
  Platinum »
    PDB 3ef3-3wua »
      3un9 »

Platinum in PDB 3un9: Crystal Structure of An Immune Receptor

Protein crystallography data

The structure of Crystal Structure of An Immune Receptor, PDB code: 3un9 was solved by M.Hong, S.I.Yoon, I.A.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 77.24 / 2.65
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 99.011, 123.469, 145.848, 90.00, 90.00, 90.00
R / Rfree (%) 22.3 / 26.7

Platinum Binding Sites:

The binding sites of Platinum atom in the Crystal Structure of An Immune Receptor (pdb code 3un9). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total 4 binding sites of Platinum where determined in the Crystal Structure of An Immune Receptor, PDB code: 3un9:
Jump to Platinum binding site number: 1; 2; 3; 4;

Platinum binding site 1 out of 4 in 3un9

Go back to Platinum Binding Sites List in 3un9
Platinum binding site 1 out of 4 in the Crystal Structure of An Immune Receptor


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of Crystal Structure of An Immune Receptor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt1001

b:85.3
occ:0.32
NE2 A:HIS816 2.0 64.3 1.0
CE1 A:HIS816 2.1 63.4 1.0
CD2 A:HIS816 3.3 54.3 1.0
ND1 A:HIS816 3.4 54.4 1.0
CG A:HIS816 3.9 50.6 1.0
OH A:TYR844 4.3 68.3 1.0
CZ A:TYR844 4.7 61.8 1.0
CE1 A:TYR844 4.9 58.5 1.0

Platinum binding site 2 out of 4 in 3un9

Go back to Platinum Binding Sites List in 3un9
Platinum binding site 2 out of 4 in the Crystal Structure of An Immune Receptor


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 2 of Crystal Structure of An Immune Receptor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt1002

b:45.1
occ:0.11
CG B:GLN686 4.2 88.7 1.0
CG1 A:VAL719 4.5 69.8 1.0
CA A:VAL719 4.7 69.6 1.0
O A:VAL719 4.7 72.3 1.0
CD B:GLN686 4.8 1.0 1.0
CB A:VAL719 5.0 69.0 1.0

Platinum binding site 3 out of 4 in 3un9

Go back to Platinum Binding Sites List in 3un9
Platinum binding site 3 out of 4 in the Crystal Structure of An Immune Receptor


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 3 of Crystal Structure of An Immune Receptor within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Pt1001

b:82.5
occ:0.27
CE1 B:HIS816 2.3 0.8 1.0
NE2 B:HIS816 2.4 1.0 1.0
ND1 B:HIS816 3.4 0.6 1.0
CD2 B:HIS816 3.6 98.5 1.0
OH B:TYR844 3.7 0.8 1.0
CG B:HIS816 4.1 95.0 1.0
CZ B:TYR844 4.2 0.5 1.0
CE1 B:TYR844 4.6 0.5 1.0
CE2 B:TYR844 4.8 0.7 1.0

Platinum binding site 4 out of 4 in 3un9

Go back to Platinum Binding Sites List in 3un9
Platinum binding site 4 out of 4 in the Crystal Structure of An Immune Receptor


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 4 of Crystal Structure of An Immune Receptor within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Pt1001

b:69.8
occ:0.30
NE2 C:HIS816 1.9 69.4 1.0
CE1 C:HIS816 2.5 69.4 1.0
CD2 C:HIS816 3.2 59.2 1.0
ND1 C:HIS816 3.7 61.7 1.0
CG C:HIS816 4.0 56.4 1.0
OH C:TYR844 5.0 77.6 1.0

Reference:

M.Hong, S.I.Yoon, I.A.Wilson. Structure and Functional Characterization of the Rna-Binding Element of the NLRX1 Innate Immune Modulator. Immunity V. 36 337 2012.
ISSN: ISSN 1074-7613
PubMed: 22386589
DOI: 10.1016/J.IMMUNI.2011.12.018
Page generated: Thu Oct 10 10:51:33 2024

Last articles

Ca in 5MFA
Ca in 5MF4
Ca in 5MEY
Ca in 5MB1
Ca in 5MAZ
Ca in 5MER
Ca in 5MAY
Ca in 5MEH
Ca in 5MC9
Ca in 5MA7
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy