Platinum in PDB 5idd: Comment on S. W. M. Tanley and J. R. Helliwell Structural Dynamics of Cisplatin Binding to Histidine in A Protein Struct. Dyn. 1, 034701 (2014) Regarding the Refinement of 4MWK, 4MWM, 4MWN and 4OXE and the Method We Have Adopted.

Enzymatic activity of Comment on S. W. M. Tanley and J. R. Helliwell Structural Dynamics of Cisplatin Binding to Histidine in A Protein Struct. Dyn. 1, 034701 (2014) Regarding the Refinement of 4MWK, 4MWM, 4MWN and 4OXE and the Method We Have Adopted.

Protein crystallography data

Other elements in 5idd:

Platinum Binding Sites:

Platinum binding site 1 out of 3 in 5idd

Platinum Binding Sites List in 5idd

Platinum binding site 1 out of 3 in the Comment on S. W. M. Tanley and J. R. Helliwell Structural Dynamics of Cisplatin Binding to Histidine in A Protein Struct. Dyn. 1, 034701 (2014) Regarding the Refinement of 4MWK, 4MWM, 4MWN and 4OXE and the Method We Have Adopted.


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of Comment on S. W. M. Tanley and J. R. Helliwell Structural Dynamics of Cisplatin Binding to Histidine in A Protein Struct. Dyn. 1, 034701 (2014) Regarding the Refinement of 4MWK, 4MWM, 4MWN and 4OXE and the Method We Have Adopted. within 5.0Å range: probe atom residue distance (Å) B Occ A:Pt207 b:30.3 occ:0.20 ND1 A:HIS15 2.5 26.5 1.0 CG A:HIS15 3.3 19.1 1.0 O A:HOH373 3.3 11.7 1.0 CB A:HIS15 3.4 14.8 1.0 CE1 A:HIS15 3.5 29.4 1.0 CA A:HIS15 3.7 15.8 1.0 OD1 A:ASN93 3.9 17.8 1.0 O A:HIS15 4.0 20.6 1.0 C A:HIS15 4.3 14.7 1.0 NZ A:LYS96 4.4 14.7 1.0 CD2 A:HIS15 4.5 20.1 1.0 CG2 A:THR89 4.5 13.8 1.0 NE2 A:HIS15 4.6 29.8 1.0 CG A:ASN93 4.8 13.2 1.0 ND2 A:ASN93 4.9 14.8 1.0 N A:HIS15 4.9 14.2 1.0

Platinum binding site 2 out of 3 in 5idd

Platinum Binding Sites List in 5idd

Platinum binding site 2 out of 3 in the Comment on S. W. M. Tanley and J. R. Helliwell Structural Dynamics of Cisplatin Binding to Histidine in A Protein Struct. Dyn. 1, 034701 (2014) Regarding the Refinement of 4MWK, 4MWM, 4MWN and 4OXE and the Method We Have Adopted.


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 2 of Comment on S. W. M. Tanley and J. R. Helliwell Structural Dynamics of Cisplatin Binding to Histidine in A Protein Struct. Dyn. 1, 034701 (2014) Regarding the Refinement of 4MWK, 4MWM, 4MWN and 4OXE and the Method We Have Adopted. within 5.0Å range: probe atom residue distance (Å) B Occ A:Pt208 b:16.2 occ:0.23 CE1 A:HIS15 2.2 29.4 1.0 PT A:PT209 2.4 90.5 0.3 NE2 A:HIS15 2.6 29.8 1.0 OG1 A:THR89 3.4 16.6 1.0 ND1 A:HIS15 3.4 26.5 1.0 CD2 A:HIS15 3.9 20.1 1.0 CG A:HIS15 4.3 19.1 1.0 CB A:THR89 4.6 11.5 1.0 CG2 A:THR89 4.6 13.8 1.0 O A:HOH364 4.7 30.0 1.0

Platinum binding site 3 out of 3 in 5idd

Platinum Binding Sites List in 5idd

Platinum binding site 3 out of 3 in the Comment on S. W. M. Tanley and J. R. Helliwell Structural Dynamics of Cisplatin Binding to Histidine in A Protein Struct. Dyn. 1, 034701 (2014) Regarding the Refinement of 4MWK, 4MWM, 4MWN and 4OXE and the Method We Have Adopted.


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 3 of Comment on S. W. M. Tanley and J. R. Helliwell Structural Dynamics of Cisplatin Binding to Histidine in A Protein Struct. Dyn. 1, 034701 (2014) Regarding the Refinement of 4MWK, 4MWM, 4MWN and 4OXE and the Method We Have Adopted. within 5.0Å range: probe atom residue distance (Å) B Occ A:Pt209 b:90.5 occ:0.32 PT A:PT208 2.4 16.2 0.2 NE2 A:HIS15 2.7 29.8 1.0 CE1 A:HIS15 3.4 29.4 1.0 O A:HOH364 3.4 30.0 1.0 CD2 A:HIS15 3.6 20.1 1.0 NE A:ARG14 3.8 17.9 1.0 CD A:ARG14 4.2 19.2 1.0 ND1 A:HIS15 4.4 26.5 1.0 CB A:ARG14 4.4 17.5 1.0 CG A:HIS15 4.5 19.1 1.0 CZ A:ARG14 4.9 14.9 1.0 OG1 A:THR89 4.9 16.6 1.0

Reference: