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Platinum in PDB 5l3h: Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties
Enzymatic activity of Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties
All present enzymatic activity of Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties:
3.2.1.17;
3.2.1.17;
Protein crystallography data
The structure of Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties, PDB code: 5l3h
was solved by
J.R.Helliwell,
S.W.M.Tanley,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 24.93 / 1.70 |
| Space group | P 43 21 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 78.832, 78.832, 37.021, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 20.2 / 24.8 |
Other elements in 5l3h:
The structure of Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties also contains other interesting chemical elements:
| Chlorine | (Cl) | 7 atoms |
| Sodium | (Na) | 1 atom |
Platinum Binding Sites:
The binding sites of Platinum atom in the Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties
(pdb code 5l3h). This binding sites where shown within
5.0 Angstroms radius around Platinum atom.
In total 5 binding sites of Platinum where determined in the Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties, PDB code: 5l3h:
Jump to Platinum binding site number: 1; 2; 3; 4; 5;
In total 5 binding sites of Platinum where determined in the Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties, PDB code: 5l3h:
Jump to Platinum binding site number: 1; 2; 3; 4; 5;
Platinum binding site 1 out of 5 in 5l3h
Go back to
Platinum Binding Sites List in 5l3h
Platinum binding site 1 out
of 5 in the Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Platinum with other atoms in the Pt binding
site number 1 of Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties within 5.0Å range:
|
Platinum binding site 2 out of 5 in 5l3h
Go back to
Platinum Binding Sites List in 5l3h
Platinum binding site 2 out
of 5 in the Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Platinum with other atoms in the Pt binding
site number 2 of Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties within 5.0Å range:
|
Platinum binding site 3 out of 5 in 5l3h
Go back to
Platinum Binding Sites List in 5l3h
Platinum binding site 3 out
of 5 in the Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Platinum with other atoms in the Pt binding
site number 3 of Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties within 5.0Å range:
|
Platinum binding site 4 out of 5 in 5l3h
Go back to
Platinum Binding Sites List in 5l3h
Platinum binding site 4 out
of 5 in the Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Platinum with other atoms in the Pt binding
site number 4 of Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties within 5.0Å range:
|
Platinum binding site 5 out of 5 in 5l3h
Go back to
Platinum Binding Sites List in 5l3h
Platinum binding site 5 out
of 5 in the Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Platinum with other atoms in the Pt binding
site number 5 of Re-Refinement of 4DD4; Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Standard Uncertainties within 5.0Å range:
|
Reference:
J.R.Helliwell,
A.M.M.Schreurs,
L.M.J.Kroon-Batenburg,
S.Tanley.
Cisplatin Coordination Chemistry Determination at Hen Egg White Lysozyme HIS15 with Ligand Distances and Angles, and Their Standard Uncertainties, and Also Reporting A Split Occupancy Effect Arxiv 2016.
DOI: 10.3927/45371856
Page generated: Thu Oct 10 11:37:13 2024
DOI: 10.3927/45371856
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