Platinum in PDB 6zrw: Crystal Structure of the Fungal Lectin CML1

The structure of Crystal Structure of the Fungal Lectin CML1, PDB code: 6zrw was solved by S.Bleuler-Martinez, V.Olieric, M.Sharpe, G.Capitani, M.Aebi, M.Kuenzler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	61.17 / 1.35
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	44.497, 73.626, 111.956, 90, 101.03, 90
R / Rfree (%)	14.6 / 17.6

The structure of Crystal Structure of the Fungal Lectin CML1 also contains other interesting chemical elements:

Chlorine	(Cl)	26 atoms
Potassium	(K)	8 atoms

The binding sites of Platinum atom in the Crystal Structure of the Fungal Lectin CML1 (pdb code 6zrw). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total 8 binding sites of Platinum where determined in the Crystal Structure of the Fungal Lectin CML1, PDB code: 6zrw:
Jump to Platinum binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Platinum binding site 1 out of 8 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Pt204 b:222.5 occ:1.00 PT A:P3C204 0.0 222.5 1.0 CL1 A:P3C204 2.4 98.1 1.0 O A:HOH339 3.9 31.9 1.0 CE1 A:HIS5 4.2 24.8 1.0 NE1 A:TRP94 4.4 22.9 1.0 NE2 A:HIS5 4.5 25.0 1.0 O B:HOH401 4.6 45.9 1.0

Platinum binding site 2 out of 8 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 2 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Pt205 b:195.4 occ:1.00 PT A:P3C205 0.0 195.4 1.0 CL2 A:P3C205 2.4 160.4 1.0 CL1 A:P3C205 2.4 130.0 1.0 CL3 A:P3C205 2.4 135.7 1.0 CE A:LYS116 3.1 26.1 1.0 NZ A:LYS116 3.7 28.9 1.0 CD A:LYS116 3.9 22.2 1.0 CG A:LYS116 4.2 18.7 1.0 CE A:LYS19 4.3 33.1 1.0 CG A:PRO39 4.4 18.1 1.0 NZ A:LYS19 4.5 35.1 1.0 CD A:PRO39 4.8 16.4 1.0

Platinum binding site 3 out of 8 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 3 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Pt203 b:175.3 occ:1.00 PT B:PC4203 0.0 175.3 1.0 CL3 B:PC4203 2.4 175.4 1.0 CL4 B:PC4203 2.4 175.3 1.0 CL2 B:PC4203 2.4 175.6 1.0 CL1 B:PC4203 2.4 175.5 1.0 NE1 B:TRP94 3.8 20.1 1.0 O B:HOH323 3.9 29.6 1.0 CD1 B:TRP94 4.6 19.1 1.0 CE2 B:TRP94 4.8 18.6 1.0

Platinum binding site 4 out of 8 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 4 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range: probe atom residue distance (Å) B Occ C:Pt204 b:287.1 occ:1.00 PT C:P3C204 0.0 287.1 1.0 CL2 C:P3C204 2.4 162.9 1.0 CL3 C:P3C204 2.4 80.5 1.0 CL1 C:P3C204 2.4 130.4 1.0 NE1 C:TRP94 3.5 23.1 1.0 CH3 C:ACT208 4.3 51.3 1.0 CD1 C:TRP94 4.4 23.4 1.0 CE2 C:TRP94 4.5 21.5 1.0 O C:HOH323 4.6 36.6 1.0 CZ2 C:TRP94 4.7 20.9 1.0 NE D:ARG114 5.0 28.6 1.0 NH2 D:ARG114 5.0 32.9 1.0

Platinum binding site 5 out of 8 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 5 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range: probe atom residue distance (Å) B Occ D:Pt204 b:123.9 occ:1.00 PT D:PC4204 0.0 123.9 1.0 CL3 D:PC4204 2.4 126.6 1.0 CL2 D:PC4204 2.4 125.9 1.0 CL4 D:PC4204 2.4 126.3 1.0 CL1 D:PC4204 2.4 125.8 1.0 O D:HOH325 3.3 19.8 1.0 O D:HOH423 4.1 32.9 1.0 CG D:GLN66 4.6 19.4 1.0 NE2 D:GLN66 4.7 24.2 1.0 CA D:GLY65 4.7 14.7 1.0 N D:GLN66 4.8 13.9 1.0 O D:PRO17 4.9 13.2 1.0

Platinum binding site 6 out of 8 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 6 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range: probe atom residue distance (Å) B Occ D:Pt205 b:145.5 occ:1.00 PT D:PC4205 0.0 145.5 1.0 CL3 D:PC4205 2.4 146.0 1.0 CL4 D:PC4205 2.4 145.7 1.0 CL2 D:PC4205 2.4 145.3 1.0 CL1 D:PC4205 2.4 145.4 1.0 OG D:SER85 3.6 15.4 0.3 O D:HOH410 4.3 21.3 1.0 OG D:SER87 4.4 16.3 1.0 CB D:SER85 4.7 14.4 0.3 CB D:SER85 4.7 14.2 0.7 O D:HOH324 4.8 43.9 1.0 OG D:SER85 5.0 14.6 0.7

Platinum binding site 7 out of 8 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 7 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range: probe atom residue distance (Å) B Occ E:Pt204 b:199.2 occ:1.00 PT E:P3C204 0.0 199.2 1.0 CL3 E:P3C204 2.4 168.6 1.0 CL2 E:P3C204 2.4 141.6 1.0 CL1 E:P3C204 2.4 76.4 1.0 O E:HOH362 3.4 26.4 1.0 CE1 E:HIS5 4.1 17.0 1.0 NE2 E:HIS5 4.3 17.4 1.0 NE1 E:TRP94 4.4 16.3 1.0

Platinum binding site 8 out of 8 in the Crystal Structure of the Fungal Lectin CML1


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 8 of Crystal Structure of the Fungal Lectin CML1 within 5.0Å range: probe atom residue distance (Å) B Occ F:Pt203 b:211.0 occ:1.00 PT F:PC4203 0.0 211.0 1.0 CL2 F:PC4203 2.4 143.3 1.0 CL3 F:PC4203 2.4 67.1 1.0 CL1 F:PC4203 2.4 127.6 1.0 CL4 F:PC4203 2.4 141.6 1.0 O F:HOH316 3.9 27.3 1.0 CE1 F:HIS5 4.3 16.6 1.0 NE1 F:TRP94 4.5 16.6 1.0 NE2 F:HIS5 4.6 16.3 1.0 O E:HOH450 4.8 49.6 1.0

S.Bleuler-Martinez, A.Varrot, V.Olieric, M.Schubert, T.Wohlschlager, D.Plaza, M.Waelti, Y.Duport, G.Capitani, M.Aebi, M.Kuenzler. Structure and Function of A Novel Fucose-Binding Protein From the Mushroom Coprinopsis Cinerea To Be Published.