Platinum in PDB 4pm3: Structure of the Double-Stranded Dna Binding Type IV Secretion Protein Tran From Enterococcus

The structure of Structure of the Double-Stranded Dna Binding Type IV Secretion Protein Tran From Enterococcus, PDB code: 4pm3 was solved by N.Goessweiner-Mohr, W.Keller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.97 / 1.80
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	32.880, 54.940, 57.710, 90.00, 91.89, 90.00
R / Rfree (%)	16.9 / 21.3

The structure of Structure of the Double-Stranded Dna Binding Type IV Secretion Protein Tran From Enterococcus also contains other interesting chemical elements:

Bromine

(Br)

4 atoms

The binding sites of Platinum atom in the Structure of the Double-Stranded Dna Binding Type IV Secretion Protein Tran From Enterococcus (pdb code 4pm3). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total 2 binding sites of Platinum where determined in the Structure of the Double-Stranded Dna Binding Type IV Secretion Protein Tran From Enterococcus, PDB code: 4pm3:
Jump to Platinum binding site number: 1; 2;

Platinum binding site 1 out of 2 in the Structure of the Double-Stranded Dna Binding Type IV Secretion Protein Tran From Enterococcus


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of Structure of the Double-Stranded Dna Binding Type IV Secretion Protein Tran From Enterococcus within 5.0Å range: probe atom residue distance (Å) B Occ A:Pt201 b:19.1 occ:0.50 BR A:BR203 1.8 36.1 0.5 ND1 A:HIS82 2.1 12.8 1.0 NH1 A:ARG86 2.4 20.8 1.0 BR A:BR202 2.5 41.9 0.5 CZ A:ARG86 2.8 22.3 1.0 NH2 A:ARG86 2.9 26.2 1.0 CG A:HIS82 3.1 14.0 1.0 CE1 A:HIS82 3.1 16.3 1.0 CB A:HIS82 3.4 11.3 1.0 CA A:HIS82 3.6 9.7 1.0 NE A:ARG86 3.8 25.3 1.0 NE2 A:HIS82 4.2 11.1 1.0 CD2 A:HIS82 4.2 11.7 1.0 N A:HIS82 4.4 7.0 1.0 CD A:ARG86 4.5 21.6 1.0 O A:HOH304 4.6 36.0 1.0 C A:HIS82 4.6 10.6 1.0 O A:HIS82 4.7 8.9 1.0

Platinum binding site 2 out of 2 in the Structure of the Double-Stranded Dna Binding Type IV Secretion Protein Tran From Enterococcus


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 2 of Structure of the Double-Stranded Dna Binding Type IV Secretion Protein Tran From Enterococcus within 5.0Å range: probe atom residue distance (Å) B Occ B:Pt201 b:23.3 occ:0.50 ND1 B:HIS82 2.2 12.5 1.0 BR B:BR202 2.3 45.7 0.5 BR B:BR203 2.5 51.3 0.5 NH1 B:ARG86 2.7 19.2 1.0 CZ B:ARG86 3.1 21.7 1.0 NH2 B:ARG86 3.2 27.5 1.0 CG B:HIS82 3.2 12.6 1.0 CE1 B:HIS82 3.2 14.8 1.0 CB B:HIS82 3.5 11.4 1.0 CA B:HIS82 3.8 9.7 1.0 NE B:ARG86 4.0 20.2 1.0 NE2 B:HIS82 4.3 11.5 1.0 CD2 B:HIS82 4.3 9.9 1.0 N B:HIS82 4.7 7.9 1.0 CD B:ARG86 4.7 19.3 1.0 C B:HIS82 4.9 11.4 1.0

N.Goessweiner-Mohr, M.Eder, G.Hofer, C.Fercher, K.Arends, R.Birner-Gruenberger, E.Grohmann, W.Keller. Structure of the Double-Stranded Dna Binding Type IV Secretion Protein Tran From Enterococcus Acta Crystallogr.,Sect.D V. 70 2376 2014.
ISSN: ESSN 1399-0047
PubMed: 25195751
DOI: 10.1107/S1399004714014187