Platinum in PDB 6zlx: The Structure of the Clpx-Associated Factor PDIP38

The structure of The Structure of the Clpx-Associated Factor PDIP38, PDB code: 6zlx was solved by K.Zeth, D.Dougan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.31 / 3.39
Space group	P 62
Cell size a, b, c (Å), α, β, γ (°)	120.095, 120.095, 48.586, 90, 90, 120
R / Rfree (%)	24.7 / 28.7

The binding sites of Platinum atom in the The Structure of the Clpx-Associated Factor PDIP38 (pdb code 6zlx). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total 2 binding sites of Platinum where determined in the The Structure of the Clpx-Associated Factor PDIP38, PDB code: 6zlx:
Jump to Platinum binding site number: 1; 2;

Platinum binding site 1 out of 2 in the The Structure of the Clpx-Associated Factor PDIP38


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of The Structure of the Clpx-Associated Factor PDIP38 within 5.0Å range: probe atom residue distance (Å) B Occ A:Pt401 b:192.9 occ:1.00 CE A:MET249 2.8 239.3 1.0 CE1 A:HIS319 2.8 151.7 1.0 ND1 A:HIS319 2.9 139.6 1.0 CB A:MET249 3.6 204.3 1.0 CG A:MET249 3.8 227.8 1.0 CB A:ARG263 3.8 97.0 1.0 SD A:MET249 4.0 251.3 1.0 NE2 A:HIS319 4.1 148.9 1.0 CG A:HIS319 4.3 140.3 1.0 CD1 A:TRP261 4.4 165.1 1.0 O A:TRP262 4.7 132.4 1.0 NE1 A:TRP261 4.7 157.6 1.0 C A:TRP262 4.8 122.6 1.0 CA A:ARG263 4.8 110.8 1.0 N A:ARG263 4.8 117.6 1.0 CA A:MET249 4.9 184.4 1.0 CD2 A:HIS319 4.9 147.4 1.0 O A:MET249 5.0 208.2 1.0

Platinum binding site 2 out of 2 in the The Structure of the Clpx-Associated Factor PDIP38


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 2 of The Structure of the Clpx-Associated Factor PDIP38 within 5.0Å range: probe atom residue distance (Å) B Occ A:Pt402 b:284.1 occ:1.00 SG A:CYS265 2.7 132.3 1.0 CB A:CYS265 2.9 99.5 1.0 OD1 A:ASP173 3.6 125.8 1.0 NE2 A:GLN315 3.9 123.5 1.0 CA A:CYS265 4.1 90.8 1.0 CG A:ASP173 4.1 128.4 1.0 OD2 A:ASP173 4.2 152.7 1.0 CD A:GLN315 4.4 114.4 1.0 O A:TYR316 4.4 104.2 1.0 CB A:SER317 4.4 115.0 1.0 CG A:GLN315 4.6 113.9 1.0 C A:CYS265 4.9 124.9 1.0 OG A:SER317 5.0 109.5 1.0

P.Strack, E.Brodie, H.Zhan, V.Schuenemann, T.Saiyed, K.Zeth, K.Truscott, D.Dougan. PDIP38 Is A Novel Adaptor-Like Modulator of the Mitochondrial Aaa+ Protease Clpxp To Be Published.