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Platinum in PDB 8ism: Hsa-Pt Compound Complex

Protein crystallography data

The structure of Hsa-Pt Compound Complex, PDB code: 8ism was solved by J.Z.Zhang, Z.L.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 92.67 / 2.76
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 187.413, 38.573, 95.99, 90, 105.11, 90
R / Rfree (%) 22.3 / 31.2

Other elements in 8ism:

The structure of Hsa-Pt Compound Complex also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Platinum Binding Sites:

The binding sites of Platinum atom in the Hsa-Pt Compound Complex (pdb code 8ism). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total only one binding site of Platinum was determined in the Hsa-Pt Compound Complex, PDB code: 8ism:

Platinum binding site 1 out of 1 in 8ism

Go back to Platinum Binding Sites List in 8ism
Platinum binding site 1 out of 1 in the Hsa-Pt Compound Complex


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of Hsa-Pt Compound Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt1007

b:104.0
occ:1.00
PT1 A:ZJZ1007 0.0 104.0 1.0
N8 A:ZJZ1007 2.0 114.1 1.0
C4 A:ZJZ1007 2.0 100.9 1.0
S23 A:ZJZ1007 2.4 125.4 1.0
NE2 A:HIS242 2.5 83.5 1.0
C5 A:ZJZ1007 2.7 102.4 1.0
C7 A:ZJZ1007 2.9 100.5 1.0
N9 A:ZJZ1007 2.9 109.8 1.0
C22 A:ZJZ1007 3.0 109.2 1.0
C3 A:ZJZ1007 3.3 107.6 1.0
CD2 A:HIS242 3.3 67.1 1.0
CE1 A:HIS242 3.6 72.5 1.0
NZ A:LYS199 3.7 70.8 1.0
CD2 A:LEU238 3.8 77.6 1.0
C6 A:ZJZ1007 3.9 112.8 1.0
C8 A:ZJZ1007 4.2 95.3 1.0
C1 A:ZJZ1007 4.3 119.4 1.0
N24 A:ZJZ1007 4.3 92.9 1.0
CG A:HIS242 4.5 72.4 1.0
ND1 A:HIS242 4.7 77.6 1.0
C2 A:ZJZ1007 4.7 127.5 1.0
C13 A:ZJZ1007 4.7 88.4 1.0
CE A:LYS199 4.7 86.7 1.0
CG A:LEU238 4.8 77.0 1.0
CD A:LYS199 4.9 87.4 1.0
CD1 A:LEU238 4.9 82.3 1.0

Reference:

J.Z.Zhang, Z.L.Zhang. Hsa-Pt Compound Complex To Be Published.
Page generated: Thu Oct 10 11:53:42 2024

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