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Platinum in PDB 8brc: Crystal Structure of the Adduct Between Human Serum Transferrin and Cisplatin

Protein crystallography data

The structure of Crystal Structure of the Adduct Between Human Serum Transferrin and Cisplatin, PDB code: 8brc was solved by R.Troisi, F.Galardo, G.Ferraro, F.Sica, A.Merlino, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 102.77 / 3.17
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 136.34, 156.4, 107.44, 90, 90, 90
R / Rfree (%) 17.7 / 24.3

Other elements in 8brc:

The structure of Crystal Structure of the Adduct Between Human Serum Transferrin and Cisplatin also contains other interesting chemical elements:

Iron (Fe) 1 atom

Platinum Binding Sites:

The binding sites of Platinum atom in the Crystal Structure of the Adduct Between Human Serum Transferrin and Cisplatin (pdb code 8brc). This binding sites where shown within 5.0 Angstroms radius around Platinum atom.
In total only one binding site of Platinum was determined in the Crystal Structure of the Adduct Between Human Serum Transferrin and Cisplatin, PDB code: 8brc:

Platinum binding site 1 out of 1 in 8brc

Go back to Platinum Binding Sites List in 8brc
Platinum binding site 1 out of 1 in the Crystal Structure of the Adduct Between Human Serum Transferrin and Cisplatin


Mono view


Stereo pair view

A full contact list of Platinum with other atoms in the Pt binding site number 1 of Crystal Structure of the Adduct Between Human Serum Transferrin and Cisplatin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pt704

b:234.8
occ:0.60
N A:NH3705 2.0 198.2 0.6
O A:HOH827 2.1 176.1 0.6
N A:NH3706 2.1 167.8 0.6
SD A:MET256 2.2 189.1 1.0
CB A:MET256 2.9 138.4 1.0
CG A:MET256 3.1 157.4 1.0
CE A:MET256 3.7 133.4 1.0
CA A:MET256 4.4 110.4 1.0
N A:MET256 4.9 108.6 1.0

Reference:

R.Troisi, F.Galardo, G.Ferraro, F.Sica, A.Merlino. Cisplatin Binding to Human Serum Transferrin: A Crystallographic Study. Inorg.Chem. 2023.
ISSN: ISSN 0020-1669
PubMed: 36602395
DOI: 10.1021/ACS.INORGCHEM.2C04206
Page generated: Fri Apr 7 19:48:34 2023

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